6K9T
Crystal structure of a class C beta-lactamase in complex with cefotaxime
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-09-28 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.28250 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 133.219, 60.416, 56.039 |
Unit cell angles | 90.00, 111.98, 90.00 |
Refinement procedure
Resolution | 26.116 - 1.459 |
R-factor | 0.1696 |
Rwork | 0.169 |
R-free | 0.18980 |
Structure solution method | MAD |
RMSD bond length | 0.018 |
RMSD bond angle | 1.774 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.490 |
High resolution limit [Å] | 1.460 | 3.960 | 1.460 |
Rmerge | 0.084 | 0.052 | 0.519 |
Rmeas | 0.092 | 0.057 | 0.568 |
Rpim | 0.038 | 0.024 | 0.227 |
Total number of observations | 382190 | ||
Number of reflections | 65261 | 3581 | 3304 |
<I/σ(I)> | 15.9 | ||
Completeness [%] | 91.1 | 97 | 93.2 |
Redundancy | 5.9 | 5.5 | 6.1 |
CC(1/2) | 0.996 | 0.935 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 295 | 0.1M sodium cacodylate pH 5.5, 0.2M sodium chloride, 35% polyethylene glycol 400 |