6K98
Substrates promiscuity of xyloglucanases and endoglucanases of glycoside hydrolase 12 family
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL15A1 |
Synchrotron site | NSRRC |
Beamline | BL15A1 |
Temperature [K] | 298 |
Detector technology | PIXEL |
Collection date | 2019-01-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00919 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 92.708, 92.708, 119.928 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.522 - 2.032 |
R-factor | 0.1866 |
Rwork | 0.185 |
R-free | 0.21200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ks4 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.839 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.522 | 4.519 |
High resolution limit [Å] | 2.032 | 2.033 |
Number of reflections | 29949 | 11 |
<I/σ(I)> | 1.35 | |
Completeness [%] | 87.2 | |
Redundancy | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298.15 | NfEG12A was concentrated to 10 mg/ml in a buffer containing 100 mM citric acid-Na2HPO4 (pH 7.2). The protein was crystallized in a mother liquid with 0.1 M citrate (pH 5.0) and 16% (w/v) PEG 20000 using the hanging drop vapor diffusion method in 24-well plates. NfEG12A crystals was transferred to a reservoir solution supplemented with 25% (v/v) ethylene glycol to grown. Obtained crystals were cryoprotected with 25% (v/v) 2-methyl-2,4-pentanediol. The crystals were mounted on a nylon loop and cooled immediately in liquid nitrogen prior to data collection. |