6JVV
Crystal structure of maleylpyruvate hydrolase from Sphingobium.sp SYK-6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-05-31 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97934 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 67.089, 74.519, 67.967 |
Unit cell angles | 90.00, 118.56, 90.00 |
Refinement procedure
Resolution | 31.630 - 1.510 |
R-factor | 0.1526 |
Rwork | 0.151 |
R-free | 0.17370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4pfz |
RMSD bond length | 0.015 |
RMSD bond angle | 1.934 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.530 |
High resolution limit [Å] | 1.500 | 4.070 | 1.500 |
Rmerge | 0.054 | 0.039 | 0.350 |
Rmeas | 0.058 | 0.043 | 0.398 |
Rpim | 0.023 | 0.017 | 0.185 |
Total number of observations | 562926 | ||
Number of reflections | 91240 | 4672 | 2865 |
<I/σ(I)> | 13 | ||
Completeness [%] | 97.4 | 97.1 | 61.1 |
Redundancy | 6.2 | 6.4 | 4 |
CC(1/2) | 0.998 | 0.807 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG3350, Lithium sulfate |