6JVG
Crystal structure of human MTH1 in complex with compound MI0639
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13C1 |
Synchrotron site | NSRRC |
Beamline | BL13C1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-30 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.232, 67.778, 79.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.415 - 1.844 |
R-factor | 0.1895 |
Rwork | 0.185 |
R-free | 0.24250 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.902 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.910 |
High resolution limit [Å] | 1.840 | 3.960 | 1.840 |
Rmerge | 0.080 | 0.031 | 0.482 |
Rmeas | 0.092 | 0.036 | 0.554 |
Rpim | 0.045 | 0.018 | 0.267 |
Number of reflections | 27900 | 2860 | 2797 |
<I/σ(I)> | 9.7 | ||
Completeness [%] | 98.5 | 94.7 | 99.7 |
Redundancy | 3.9 | 3.9 | 3.9 |
CC(1/2) | 0.998 | 0.833 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 3.75 | 298 | 30% PEG6000, 200 mM Lithium sulphate, 100 mM Sodium acetate pH 3.75 |