6JTI
Crystal structure of native NagZ from Neisseria gonorrhoeae
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U |
| Synchrotron site | SSRF |
| Beamline | BL17U |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-03-10 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 1.0000 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 102.017, 124.088, 189.920 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 103.880 - 2.200 |
| R-factor | 0.2151 |
| Rwork | 0.214 |
| R-free | 0.23254 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4g6c |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.476 |
| Data scaling software | HKL-3000 |
| Phasing software | PHENIX |
| Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 103.880 | 2.260 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.102 | 0.656 |
| Number of reflections | 122838 | 8959 |
| <I/σ(I)> | 19.7 | |
| Completeness [%] | 100.0 | 99.9 |
| Redundancy | 14.1 | 9.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 0.2 M Sodium acetate trihydrate, 20% w/v Polyethylene glycol 3,350 pH8.0 |
