6JRE
Structure of N-terminal domain of Plasmodium vivax p43 (PfNTD) solved by Co-SAD phasing
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-14 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.59 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 87.396, 87.396, 53.412 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.800 - 2.590 |
R-factor | 0.2222 |
Rwork | 0.220 |
R-free | 0.27420 |
Structure solution method | SAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.470 |
Data reduction software | DIALS |
Phasing software | SOLVE |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 61.800 | 2.630 |
High resolution limit [Å] | 2.590 | 2.590 |
Rmeas | 0.081 | 3.353 |
Number of reflections | 6539 | 241 |
<I/σ(I)> | 27.1 | 1.2 |
Completeness [%] | 95.8 | 71.8 |
Redundancy | 58.1 | 28.3 |
CC(1/2) | 1.000 | 0.700 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 20% PEG 3350, 0.2M sodium bromide, 5% ethyl acetate |