6JP9
Crsytal structure of a XMP complexed ATPPase subunit of M. jannaschii GMP synthetase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2017-10-23 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 82.180, 100.430, 157.590 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 52.530 - 2.100 |
R-factor | 0.22372 |
Rwork | 0.221 |
R-free | 0.27316 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dpl |
RMSD bond length | 0.016 |
RMSD bond angle | 1.822 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.530 | 2.140 |
High resolution limit [Å] | 2.100 | 2.100 |
Number of reflections | 76858 | 4500 |
<I/σ(I)> | 8.9 | 1.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.6 | 7.5 |
CC(1/2) | 0.989 | 0.645 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 5.5 | 294.15 | 2 micro liters of 18 mg/ml protein solution containing 1 mM XMP, 1 mM PPi, 20 mM MgCl2 was mixed with an equal volume of crystallization condition containing 20 % (w/v) PEG 1500 and 0.1 M MIB buffer pH 5.5 |