6JN0
Structure of H247A mutant peptidoglycan peptidase complex with tetra-tri peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-12-23 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.0 |
Spacegroup name | P 61 |
Unit cell lengths | 114.796, 114.796, 55.621 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 31.136 - 2.164 |
R-factor | 0.1628 |
Rwork | 0.161 |
R-free | 0.19920 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.980 |
High resolution limit [Å] | 1.950 | 5.290 | 1.950 |
Rmerge | 0.057 | 0.041 | 0.328 |
Rmeas | 0.073 | 0.053 | 0.428 |
Rpim | 0.046 | 0.034 | 0.273 |
Number of reflections | 22451 | 2681 | 2811 |
<I/σ(I)> | 15.3 | ||
Completeness [%] | 99.0 | 90.7 | 93.2 |
Redundancy | 2.4 | 2.3 | 2.1 |
CC(1/2) | 0.991 | 0.828 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 296 | 1.8 M ammonium citrate tribasic at pH 7.0 |