6JLS
Crystal Structure of FMN-dependent Cysteine Decarboxylases TvaF from Thioviridamide Biosynthesis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-26 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9793 |
Spacegroup name | F 41 3 2 |
Unit cell lengths | 216.915, 216.915, 216.915 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 76.691 - 2.240 |
R-factor | 0.2166 |
Rwork | 0.216 |
R-free | 0.23150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1g63 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.890 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3235: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 76.691 | 2.310 |
High resolution limit [Å] | 2.240 | 2.240 |
Number of reflections | 21611 | 1937 |
<I/σ(I)> | 11.5 | |
Completeness [%] | 100.0 | |
Redundancy | 29.8 | |
CC(1/2) | 0.999 | 0.395 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | Two micro liters of protein solution containing 7 mg/ml Tvaf in 20 mM Tris, pH 8.0, 50 mM NaCl, was mixed with 2 micro liters of well solution containing 0.1 M Sodium chloride, 0.1M Bicine pH 9.0, and 30% PEG 500 MME (vol/vol). The crystallization drop was incubated against 100 micro liters of well solution. |