6JKP
Crystal structure of sulfoacetaldehyde reductase from Bifidobacterium kashiwanohense in complex with NAD+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-31 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 70.881, 112.317, 93.573 |
Unit cell angles | 90.00, 107.53, 90.00 |
Refinement procedure
Resolution | 43.194 - 3.008 |
R-factor | 0.2043 |
Rwork | 0.200 |
R-free | 0.25730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vhd |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3247) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.050 |
High resolution limit [Å] | 3.000 | 8.130 | 3.000 |
Rmerge | 0.193 | 0.086 | 0.800 |
Rmeas | 0.230 | 0.106 | 1.002 |
Rpim | 0.124 | 0.061 | 0.591 |
Number of reflections | 27084 | 1393 | 1299 |
<I/σ(I)> | 7.9 | ||
Completeness [%] | 98.2 | 97.6 | 93.3 |
Redundancy | 3.4 | 3 | 2.8 |
CC(1/2) | 0.984 | 0.555 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 289.15 | 0.2 M Ammonium acetate, 0.1 M BIS-TRIS pH 5.5, 25% W/V PEG 3350 |