6JJK
Crystal structure of the DegP dodecamer with a modulator
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-06-05 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 214.920, 122.427, 140.242 |
Unit cell angles | 90.00, 117.72, 90.00 |
Refinement procedure
Resolution | 35.479 - 3.600 |
R-factor | 0.2027 |
Rwork | 0.199 |
R-free | 0.26530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3otp |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.660 |
High resolution limit [Å] | 3.600 | 9.750 | 3.600 |
Rmerge | 0.102 | 0.058 | 0.527 |
Rmeas | 0.110 | 0.064 | 0.566 |
Rpim | 0.042 | 0.026 | 0.206 |
Total number of observations | 270801 | ||
Number of reflections | 37293 | 1879 | 1815 |
<I/σ(I)> | 11.2 | ||
Completeness [%] | 99.9 | 97.2 | 100 |
Redundancy | 7.3 | 5.9 | 7.5 |
CC(1/2) | 0.996 | 0.902 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 10% PEG3350 and 0.1 M tacsimate pH 3.4 |