Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6JE8

crystal structure of a beta-N-acetylhexosaminidase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyPIXEL
Collection date2018-10-19
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9792
Spacegroup nameP 21 21 21
Unit cell lengths69.422, 84.345, 92.447
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.224 - 1.798
R-factor0.145
Rwork0.143
R-free0.17690
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3rcn
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMoRDa
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.860
High resolution limit [Å]1.8003.8801.800
Rmerge0.1030.0560.508
Rmeas0.1130.0610.567
Rpim0.0450.0250.246
Total number of observations303267
Number of reflections5033953224705
<I/σ(I)>11.7
Completeness [%]98.698.893.4
Redundancy65.94.8
CC(1/2)0.9960.851
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2891.1M Sodium malonate, pH 7.0; 0.1 M HEPES pH 7.0; 0.5%v/v Jeffamine ED-2001 pH 7.0 and 0.2 M sodium formate; 20% PEG3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon