6JDU
Crystal structure of PRRSV nsp10 (helicase)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2015-07-13 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97861 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 92.914, 92.914, 147.696 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.810 |
R-factor | 0.22556 |
Rwork | 0.225 |
R-free | 0.23827 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jdr |
RMSD bond length | 0.007 |
RMSD bond angle | 1.147 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.850 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.119 | 0.703 |
Rmeas | 0.124 | 0.741 |
Rpim | 0.035 | 0.230 |
Number of reflections | 16581 | 649 |
<I/σ(I)> | 19.9 | 2.4 |
Completeness [%] | 97.7 | 81.9 |
Redundancy | 11.8 | 9.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.03 | 277 | PEG 400, Na HEPES, calcium chloride |