6JDO
Crystal structure of N-acetyl mannosmaine kinase with AMP-PNP from Pasteurella multocida
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97857 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 126.433, 126.433, 82.912 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.770 - 2.002 |
R-factor | 0.1938 |
Rwork | 0.192 |
R-free | 0.22940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jda |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.2) |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3211: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.690 | 45.690 | 2.050 |
High resolution limit [Å] | 2.000 | 8.950 | 2.000 |
Rmerge | 0.074 | 0.032 | 1.157 |
Rmeas | 0.078 | 0.034 | 1.223 |
Rpim | 0.025 | 0.011 | 0.392 |
Total number of observations | 514396 | ||
Number of reflections | 51733 | 648 | 3739 |
<I/σ(I)> | 15 | ||
Completeness [%] | 99.9 | 99.2 | 98.5 |
Redundancy | 9.9 | 8.7 | 9.7 |
CC(1/2) | 0.999 | 0.999 | 0.872 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 293 | 0.1 M Tascimate 5.0, 20% v/v isopropanol, 20% w/v PEG 4000, 100% v/v ethylene glycol |