6JCG
Room temperature structure of HIV-1 Integrase catalytic core domain by serial femtosecond crystallography.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | FREE ELECTRON LASER |
Source details | PAL-XFEL BEAMLINE NCI |
Synchrotron site | PAL-XFEL |
Beamline | NCI |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2018-10-15 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.987 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 73.275, 73.275, 66.710 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 24.665 - 2.500 |
R-factor | 0.1802 |
Rwork | 0.177 |
R-free | 0.21170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1itg |
RMSD bond length | 0.003 |
RMSD bond angle | 0.446 |
Data reduction software | Cheetah |
Data scaling software | CrystFEL |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.670 | 2.610 |
High resolution limit [Å] | 2.500 | 2.500 |
Number of reflections | 13866 | 872 |
<I/σ(I)> | 7.26 | 1.45 |
Completeness [%] | 99.8 | 100 |
Redundancy | 406.99 | 275.68 |
CC(1/2) | 0.994 | 0.551 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 289 | 0.2mM Ammonium sulfate, 0.1M sodiumcacodylate trihydrate, 30% PEG 8000 |