6JAD
Crystal structure of ABC transporter alpha-glycoside-binding protein in complex with palatinose
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2018-02-27 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 84.770, 84.770, 145.830 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 73.290 - 1.900 |
| R-factor | 0.1415 |
| Rwork | 0.139 |
| R-free | 0.18160 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6j9w |
| RMSD bond length | 0.018 |
| RMSD bond angle | 1.804 |
| Data reduction software | iMOSFLM (7.2.2) |
| Data scaling software | Aimless (0.7.3) |
| Phasing software | PHASER (2.8.2) |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 73.290 | 9.110 |
| High resolution limit [Å] | 1.900 | 1.900 |
| Rmerge | 0.083 | 0.449 |
| Rmeas | 0.097 | 0.524 |
| Rpim | 0.050 | 0.268 |
| Number of reflections | 42666 | 2695 |
| <I/σ(I)> | 13.2 | 3.6 |
| Completeness [%] | 99.9 | 99.6 |
| Redundancy | 6.6 | 6.9 |
| CC(1/2) | 0.997 | 0.915 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | MICROBATCH | 5 | 277 | 0.05 M Citric Acid, 0.05 M Bis-Tris Propane, 16% PEG 3350 |
