6JAD
Crystal structure of ABC transporter alpha-glycoside-binding protein in complex with palatinose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2018-02-27 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 84.770, 84.770, 145.830 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 73.290 - 1.900 |
R-factor | 0.1415 |
Rwork | 0.139 |
R-free | 0.18160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6j9w |
RMSD bond length | 0.018 |
RMSD bond angle | 1.804 |
Data reduction software | iMOSFLM (7.2.2) |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER (2.8.2) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 73.290 | 9.110 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.083 | 0.449 |
Rmeas | 0.097 | 0.524 |
Rpim | 0.050 | 0.268 |
Number of reflections | 42666 | 2695 |
<I/σ(I)> | 13.2 | 3.6 |
Completeness [%] | 99.9 | 99.6 |
Redundancy | 6.6 | 6.9 |
CC(1/2) | 0.997 | 0.915 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 5 | 277 | 0.05 M Citric Acid, 0.05 M Bis-Tris Propane, 16% PEG 3350 |