6J9C
Crystal structure of Arabidopsis thaliana transcription factor LEC2-DNA complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-18 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 71.073, 96.601, 99.263 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.591 - 3.102 |
R-factor | 0.2263 |
Rwork | 0.225 |
R-free | 0.25680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6j9a |
RMSD bond length | 0.010 |
RMSD bond angle | 1.156 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.210 |
High resolution limit [Å] | 3.100 | 3.100 |
Rmerge | 0.146 | 0.527 |
Number of reflections | 8746 | 1271 |
<I/σ(I)> | 9.4 | 3.56 |
Completeness [%] | 99.5 | 99.8 |
Redundancy | 5.4 | 5.7 |
CC(1/2) | 0.995 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.1M sodium HEPES pH 7.5, 15% PEG 20000 |