6J93
Crystal structure of Peptidyl-tRNA hydrolase from Acinetobacter baumannii at 0.95 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-01 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97199 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 33.995, 66.257, 76.186 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.130 - 0.950 |
R-factor | 0.13374 |
Rwork | 0.134 |
R-free | 0.15278 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5y9a |
RMSD bond length | 0.018 |
RMSD bond angle | 1.986 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.130 | 0.970 |
High resolution limit [Å] | 0.950 | 0.950 |
Rmerge | 0.100 | 1.420 |
Rmeas | 0.100 | |
Rpim | 0.034 | 0.630 |
Number of reflections | 97251 | 10028 |
<I/σ(I)> | 9.7 | 0.45 |
Completeness [%] | 88.9 | |
Redundancy | 8.8 | 3.802 |
CC(1/2) | 0.990 | 0.400 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 12% PEG 1500, 0.1M HEPES, pH 7.5, 20% Glycerol |