6J0I
Structure of [Co2+-(Chromomycin A3)2]-d(TTGGCGAA)2 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-12 |
Detector | Bruker DIP-6040 |
Wavelength(s) | 0.90000 |
Spacegroup name | P 2 2 21 |
Unit cell lengths | 47.826, 48.096, 96.725 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 16.120 - 2.500 |
R-factor | 0.259 |
Rwork | 0.257 |
R-free | 0.29000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vaq |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.9_1692) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.043 | 0.512 |
Rmeas | 0.047 | 0.037 |
Rpim | 0.019 | 0.017 |
Total number of observations | 53369 | |
Number of reflections | 12624 | 549 |
<I/σ(I)> | 21.7 | |
Completeness [%] | 95.5 | 100 |
Redundancy | 6.8 | 7.2 |
CC(1/2) | 0.996 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.3 | 277.15 | 5mM Sodium Cacodylate (pH 7.3), 7mM MgCl2, 12mM Spermine, 4% PEG 400, 4% 1-propanol |