6IZ9
Crystal structure of the apo form of a beta-transaminase from Mesorhizobium sp. strain LUK
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2012-04-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97937 |
Spacegroup name | P 31 |
Unit cell lengths | 62.397, 62.397, 171.036 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.220 - 2.199 |
R-factor | 0.2466 |
Rwork | 0.241 |
R-free | 0.29120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2e7u |
RMSD bond length | 0.004 |
RMSD bond angle | 0.696 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.240 |
High resolution limit [Å] | 2.199 | 2.200 |
Rmerge | 0.144 | 0.517 |
Number of reflections | 37878 | 1906 |
<I/σ(I)> | 21.5 | |
Completeness [%] | 100.0 | |
Redundancy | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 293 | 0.3 M sodium citrate tribasic dihydrate, 0.1 M HEPES (pH 7.6), 0.1 M cadmium chloride hydrate |