6ITV
Crystal structure of activated c-KIT in complex with compound
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSRRC BEAMLINE BL15A1 |
| Synchrotron site | NSRRC |
| Beamline | BL15A1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-04-18 |
| Detector | RAYONIX MX300HE |
| Wavelength(s) | 1 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 59.853, 59.853, 197.984 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 26.767 - 1.881 |
| R-factor | 0.1832 |
| Rwork | 0.180 |
| R-free | 0.23060 |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.828 |
| Data scaling software | HKL-2000 |
| Refinement software | PHENIX (dev_2621) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 30.000 | 30.000 | 1.950 |
| High resolution limit [Å] | 1.880 | 4.050 | 1.880 |
| Rmerge | 0.055 | 0.025 | 0.654 |
| Rmeas | 0.062 | 0.027 | 0.729 |
| Rpim | 0.027 | 0.012 | 0.318 |
| Total number of observations | 154364 | ||
| Number of reflections | 30279 | 3230 | 2935 |
| <I/σ(I)> | 13.7 | ||
| Completeness [%] | 99.7 | 97 | 100 |
| Redundancy | 5.1 | 4.8 | 5.2 |
| CC(1/2) | 0.999 | 0.857 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 291 | 15% PEG 3350, 0.1M sodium citrate tribasic dihydrate, pH 5.6, 3% ethylene glycol, 3% 1,6-hexanediol |






