6IS5
P domain of GII.3-TV24 with A-tetrasaccharide complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-05-26 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 122.368, 122.368, 215.198 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.250 - 2.501 |
R-factor | 0.1888 |
Rwork | 0.187 |
R-free | 0.22950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ir5 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.651 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.165 | 0.518 |
Number of reflections | 57182 | 5551 |
<I/σ(I)> | 13 | 4.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 8.1 | 8.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 9.6% (w/v) polyethylene glycol 3350, 160mM ammonium citrate tribasic (pH 7.0), 20mM tri-sodium citrate dehydrate (pH 5.6), 500mM 1,6-hexanediol, 30mM glycl-glycl-glycin |