Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6IS5

P domain of GII.3-TV24 with A-tetrasaccharide complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]100
Detector technologyCCD
Collection date2014-05-26
DetectorADSC QUANTUM 315
Wavelength(s)1.0
Spacegroup nameP 42 21 2
Unit cell lengths122.368, 122.368, 215.198
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.250 - 2.501
R-factor0.1888
Rwork0.187
R-free0.22950
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ir5
RMSD bond length0.004
RMSD bond angle0.651
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.590
High resolution limit [Å]2.5002.500
Rmerge0.1650.518
Number of reflections571825551
<I/σ(I)>134.5
Completeness [%]100.0100
Redundancy8.18.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2939.6% (w/v) polyethylene glycol 3350, 160mM ammonium citrate tribasic (pH 7.0), 20mM tri-sodium citrate dehydrate (pH 5.6), 500mM 1,6-hexanediol, 30mM glycl-glycl-glycin

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon