6IOZ
Structural insights of idursulfase beta
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 11C |
Synchrotron site | PAL/PLS |
Beamline | 11C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9794 |
Spacegroup name | P 31 1 2 |
Unit cell lengths | 70.825, 70.825, 285.697 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.616 - 3.100 |
R-factor | 0.1996 |
Rwork | 0.197 |
R-free | 0.24310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5fql |
RMSD bond length | 0.004 |
RMSD bond angle | 0.787 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.150 |
High resolution limit [Å] | 3.100 | 8.400 | 3.100 |
Rmerge | 0.149 | 0.099 | 0.316 |
Rmeas | 0.158 | 0.104 | 0.363 |
Rpim | 0.049 | 0.030 | 0.168 |
Number of reflections | 12919 | 848 | 412 |
<I/σ(I)> | 9 | ||
Completeness [%] | 83.2 | 97.7 | 56.1 |
Redundancy | 6.6 | 11.4 | 2.6 |
CC(1/2) | 0.994 | 0.328 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 1.0 M LiCl 0.1M MES (pH 6.0) 20% w/v PEG 6K |