Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6IO6

Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A at non-catalytic site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-03-25
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9792
Spacegroup nameI 41 2 2
Unit cell lengths122.260, 122.260, 157.780
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.321 - 2.640
R-factor0.2042
Rwork0.202
R-free0.24280
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1gad
Data reduction softwarexia2
Data scaling softwareAimless (0.6.2)
Phasing softwarePHASER (2.7.2)
Refinement softwarePHENIX ((1.14_3260:000))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.32048.3202.710
High resolution limit [Å]2.64011.8102.640
Rmerge0.2510.1413.354
Rmeas0.2560.1443.432
Rpim0.0510.0310.689
Total number of observations480506517435628
Number of reflections179242431315
<I/σ(I)>8.814.82
Completeness [%]99.998.399.4
Redundancy26.821.327.1
CC(1/2)0.9730.9780.700
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72980.1M Malic acid, PEG3350 20%

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon