6IF0
Crystal structure of CERT START domain in complex with compound D16
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-05 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 1 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 59.825, 59.825, 152.593 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 - 1.800 |
R-factor | 0.1975 |
Rwork | 0.195 |
R-free | 0.23940 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.619 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.1) |
Phasing software | REFMAC (5.8.0230) |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.300 | 42.300 | 1.840 |
High resolution limit [Å] | 1.800 | 9.000 | 1.800 |
Rmerge | 0.078 | 0.025 | 0.768 |
Rmeas | 0.085 | 0.027 | 0.837 |
Rpim | 0.033 | 0.011 | 0.329 |
Total number of observations | 171003 | ||
Number of reflections | 26600 | 283 | 1517 |
<I/σ(I)> | 7.7 | ||
Completeness [%] | 99.9 | 99.4 | 100 |
Redundancy | 6.4 | 5.3 | 6.4 |
CC(1/2) | 0.998 | 0.999 | 0.734 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.9 | 293 | 0.1M trisodium citrate/HCL buffer, pH 5.9 containing 24% PEG3350 and 0.2% n-octyl-beta-D-glucoside |