6ICJ
Crystal structure of PPARgamma with compound BR102375K
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 277 |
Detector technology | CCD |
Collection date | 2017-09-27 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97960 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 56.051, 87.030, 121.224 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.026 - 2.483 |
R-factor | 0.2351 |
Rwork | 0.230 |
R-free | 0.28200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3kmg |
RMSD bond length | 0.008 |
RMSD bond angle | 0.967 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.030 | 2.572 |
High resolution limit [Å] | 2.483 | 2.483 |
Rmerge | 0.068 | 0.382 |
Rmeas | 0.073 | |
Rpim | 0.026 | 0.142 |
Number of reflections | 10650 | 998 |
<I/σ(I)> | 28.87 | |
Completeness [%] | 98.5 | |
Redundancy | 7.8 | |
CC(1/2) | 0.998 | 0.974 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M NH4 Acetate, 0.1 M HEPES 7.5 pH, 25 %w/v PEG 3350 |