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6I8Q

Dye type peroxidase Aa from Streptomyces lividans: 117.6 kGy structure

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]293
Detector technologyPIXEL
Collection date2018-06-28
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameP 1 21 1
Unit cell lengths73.032, 68.364, 74.943
Unit cell angles90.00, 105.72, 90.00
Refinement procedure
Resolution37.389 - 1.740
R-factor0.1794
Rwork0.178
R-free0.23040
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6i43
RMSD bond length0.007
RMSD bond angle0.845
Data reduction softwareDIALS
Data scaling softwarecctbx.prime
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.14_3260: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.7001.770
High resolution limit [Å]1.7401.740
Rmerge0.9070.883
Number of reflections72957
<I/σ(I)>2.520.58
Completeness [%]100.099.8
Redundancy48.911.9
CC(1/2)0.9510.510
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE82937 mg/ml protein mixed with 17% PEG 1500 and 67 mM MIB buffer (comprising imidazole, malonate and boric acid)

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PDB entries from 2024-05-15

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