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6I8J

Dye type peroxidase Aa from Streptomyces lividans: 131.2 kGy structure

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]293
Detector technologyPIXEL
Collection date2018-01-17
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameP 1 21 1
Unit cell lengths72.989, 68.288, 74.863
Unit cell angles90.00, 105.76, 90.00
Refinement procedure
Resolution44.614 - 1.900
R-factor0.1687
Rwork0.167
R-free0.21200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6i43
RMSD bond length0.007
RMSD bond angle0.870
Data reduction softwareDIALS
Data scaling softwarecctbx.prime
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.14_3260: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.6301.930
High resolution limit [Å]1.9001.900
Rmerge0.7190.776
Number of reflections55954
<I/σ(I)>2.450.64
Completeness [%]100.099.8
Redundancy34.510.2
CC(1/2)0.9630.591
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE82937 mg/ml protein mixed with 17% PEG 1500 and 67 mM MIB buffer (comprising imidazole, malonate and boric acid)

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PDB entries from 2024-05-15

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