6I4U
Crystal structure of the disease-causing G426E mutant of the human dihydrolipoamide dehydrogenase
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.1 |
| Synchrotron site | BESSY |
| Beamline | 14.1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-09-24 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9184 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 118.737, 168.663, 61.041 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 42.559 - 1.840 |
| R-factor | 0.1841 |
| Rwork | 0.184 |
| R-free | 0.20060 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1zmd |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.807 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | MOLREP |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 42.559 | 42.559 | 1.950 |
| High resolution limit [Å] | 1.840 | 5.480 | 1.840 |
| Rmerge | 0.098 | 0.027 | 1.307 |
| Rmeas | 0.106 | 0.029 | 1.414 |
| Number of reflections | 106853 | 4320 | 16793 |
| <I/σ(I)> | 13.27 | 50.11 | 1.24 |
| Completeness [%] | 99.2 | 98.7 | 97.5 |
| Redundancy | 6.658 | 6.138 | 6.811 |
| CC(1/2) | 0.999 | 1.000 | 0.807 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 2 M ammonium sulfate, 2(v/v)% PEG 400, 0.1 M Hepes (pH 7.5) |






