6I4P
Crystal structure of the disease-causing G194C mutant of the human dihydrolipoamide dehydrogenase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 119.487, 169.423, 61.865 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.093 - 1.600 |
R-factor | 0.1876 |
Rwork | 0.187 |
R-free | 0.21150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1zmd |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.093 | 46.093 | 1.690 |
High resolution limit [Å] | 1.600 | 4.770 | 1.600 |
Rmerge | 0.082 | 0.032 | 1.962 |
Rmeas | 0.089 | 0.035 | 2.151 |
Number of reflections | 162966 | 6623 | 23841 |
<I/σ(I)> | 11.26 | 46.1 | 0.57 |
Completeness [%] | 97.4 | 98.9 | 89.1 |
Redundancy | 6.452 | 6.048 | 5.939 |
CC(1/2) | 0.999 | 0.999 | 0.669 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.9 | 293 | 2 M ammonium sulfate, 2(v/v)% PEG 400, 0.1 M Bis-Tris (pH 6.9) |