6HR9
Nitrocefin acylation of both catalytic serines of the Y409 mutant of penicillin-binding protein 3 from P. aeruginosa
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-04 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.042, 83.261, 88.733 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 60.720 - 1.990 |
R-factor | 0.2248 |
Rwork | 0.222 |
R-free | 0.28050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3pbo |
RMSD bond length | 0.008 |
RMSD bond angle | 1.554 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.750 | 2.030 |
High resolution limit [Å] | 1.990 | 1.990 |
Rmeas | 0.135 | |
Number of reflections | 35268 | 35268 |
<I/σ(I)> | 9.1 | |
Completeness [%] | 100.0 | |
Redundancy | 8.4 | |
CC(1/2) | 0.300 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 25%(w/v) polyethylene glycol 3350, 0.1M Bis-Tris propane, 1%(w/v) protamine sulphate, pH 7.8. |