6HJ4
Crystal structure of Whitewater Arroyo virus GP1 glycoprotein at pH 7.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-06 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97950 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 106.660, 106.660, 74.810 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.473 - 2.430 |
R-factor | 0.2217 |
Rwork | 0.220 |
R-free | 0.25220 |
Structure solution method | SAD |
RMSD bond length | 0.002 |
RMSD bond angle | 0.549 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.000 | 2.490 |
High resolution limit [Å] | 2.430 | 2.430 |
Rmerge | 0.068 | 3.163 |
Number of reflections | 15417 | |
<I/σ(I)> | 22.8 | |
Completeness [%] | 99.9 | |
Redundancy | 18.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 1.0 mg/ml protein, 0.1 M HEPES-Na pH 7.5, and 0.05 M cadmium sulphate |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 1.0 mg/ml protein, 0.1 M HEPES-Na pH 7.5, and 0.05 M cadmium sulphate |