6HGW
Soluble epoxide hydrolase in complex with 2-(4-fluorophenyl)-N-(4-phenoxybenzyl)ethanamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-09-16 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.072 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 80.180, 92.420, 106.530 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 53.265 - 2.407 |
R-factor | 0.1861 |
Rwork | 0.180 |
R-free | 0.23880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6fr2 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.741 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.265 | 53.265 | 2.470 |
High resolution limit [Å] | 2.407 | 10.760 | 2.410 |
Rmerge | 0.111 | 0.051 | 1.331 |
Rmeas | 0.116 | 0.054 | 1.387 |
Number of reflections | 15705 | 212 | 1141 |
<I/σ(I)> | 15.44 | 38.72 | 2.08 |
Completeness [%] | 100.0 | 99.5 | 100 |
Redundancy | 12.928 | 10.349 | 12.844 |
CC(1/2) | 0.998 | 0.997 | 0.757 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 1 uL protein solution Protein (5-10 mg/mL , 50 mM NaCl, 50 mM sodium phosphate, 10% glycerol (98%), 2 mM DTT at pH 7.4) was mixed in different ratios (2/1, 1/1, 1/2) with precipitant solution (23 %-28 % (w/v) polyethylenglycol (PEG) 6000, 70 mM ammonium acetat, 200 mM magnesium acetat, 100 mM sodium cacodylate at pH 6.1-6.5) |