6HES
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with the NVP-BHG712 derivative AT050
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-27 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.00004 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 32.672, 106.111, 40.346 |
Unit cell angles | 90.00, 108.64, 90.00 |
Refinement procedure
Resolution | 38.230 - 1.128 |
R-factor | 0.1815 |
Rwork | 0.181 |
R-free | 0.20510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6fnf |
RMSD bond length | 0.015 |
RMSD bond angle | 1.049 |
Data reduction software | XDS (XDSapp 2.0) |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.230 | 1.200 |
High resolution limit [Å] | 1.128 | 1.128 |
Rmeas | 0.154 | |
Number of reflections | 93065 | 12730 |
<I/σ(I)> | 8.04 | 0.56 |
Completeness [%] | 95.4 | 81 |
Redundancy | 6.47 | 4.92 |
CC(1/2) | 0.998 | 0.193 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 37.5 % MPD/PEG1000/PEG3350 (MD), 0.1 M Amino Acids Mix (MD), 0.1 M Tris pH 6.5 |