6HBT
The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with arcaine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-05 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9197 |
Spacegroup name | H 3 2 |
Unit cell lengths | 55.460, 55.460, 135.040 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.730 - 1.660 |
R-factor | 0.2066 |
Rwork | 0.206 |
R-free | 0.21380 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.195 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.14_3228: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.730 | 1.690 |
High resolution limit [Å] | 1.660 | 1.660 |
Rmerge | 0.056 | 1.316 |
Rpim | 0.028 | 0.647 |
Number of reflections | 17902 | 463 |
<I/σ(I)> | 19.6 | 1.3 |
Completeness [%] | 98.9 | 97.06 |
Redundancy | 4.79 | 5 |
CC(1/2) | 0.999 | 0.571 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | 0.01 M Magnesium Acetate, 0.05 M MES pH 5.6, 2.5 M Ammonium Sulfate |