Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6H2J

Crystal structure of the HsdR subunit of the EcoR124I restriction enzyme with the C-terminal domain

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X12
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX12
Temperature [K]100
Detector technologyCCD
Collection date2006-10-20
DetectorMARRESEARCH
Wavelength(s)0.987
Spacegroup nameP 21 21 21
Unit cell lengths123.910, 129.922, 161.010
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.968 - 2.600
R-factor0.2035
Rwork0.203
R-free0.26380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2w00 5j3n
RMSD bond length0.009
RMSD bond angle1.008
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAuto-Rickshaw
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.640
High resolution limit [Å]2.6002.600
Number of reflections80316
<I/σ(I)>18.2
Completeness [%]100.0
Redundancy9.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2771 UL OF PROTEIN IN 20 MM PHOSPHATE PH 7.5, 100 MM KCL, 5 MM ATP WAS MIXED WITH 2 UL OF RESERVOIR, CONTAINING 0.2 M LI2SO4, 8 % PEG 20K, 8 % PEG 550 MME, 1.5 MM DTT

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon