6H07
X-ray structure of Lactobacillus brevis alcohol dehydrogenase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-17 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.968 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 56.030, 83.310, 114.380 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.150 - 1.482 |
R-factor | 0.18126 |
Rwork | 0.180 |
R-free | 0.20304 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1nxq |
RMSD bond length | 0.025 |
RMSD bond angle | 2.171 |
Data reduction software | XDS (VERSION Jan 26, 2018 BUILT=20180302) |
Data scaling software | XDS (VERSION Jan 26, 2018 BUILT=20180302) |
Phasing software | PHASER (2.8.2) |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.150 | 1.535 |
High resolution limit [Å] | 1.482 | 1.482 |
Rmerge | 0.069 | 1.664 |
Rmeas | 0.073 | 0.810 |
Rpim | 0.023 | 0.553 |
Number of reflections | 882139 | |
<I/σ(I)> | 17.4 | |
Completeness [%] | 98.2 | 93.25 |
Redundancy | 6.4 | 9.8 |
CC(1/2) | 0.999 | 0.643 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293.15 | PEG 550 MME, Magnesium chloride, HEPES |