6GYW
Crystal structure of DacA from Staphylococcus aureus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.799, 68.190, 76.796 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.990 - 1.700 |
R-factor | 0.1749 |
Rwork | 0.173 |
R-free | 0.20040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rv7 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.962 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 68.190 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.078 | 0.627 |
Number of reflections | 32376 | 1659 |
<I/σ(I)> | 13.9 | 2 |
Completeness [%] | 99.9 | 99 |
Redundancy | 12.2 | 10 |
CC(1/2) | 0.999 | 0.968 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M LiCl, 0.1M Na-Cacodylate pH 6.5, 30% Peg400 |