6GY8
Crystal structure of XaxA from Xenorhabdus nematophila
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-06 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.8233 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.270, 90.830, 153.040 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.415 - 2.500 |
R-factor | 0.2406 |
Rwork | 0.238 |
R-free | 0.28560 |
Structure solution method | SAD |
RMSD bond length | 0.002 |
RMSD bond angle | 0.462 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | HKL2Map |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.560 |
High resolution limit [Å] | 2.500 | 2.500 |
Number of reflections | 62589 | |
<I/σ(I)> | 18.47 | |
Completeness [%] | 99.9 | |
Redundancy | 15.93 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 293.15 | 0.2 M sodium chloride, 0.1 M phosphate citrate pH 4.2, 10 % PEG 3000 |
1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 293.15 | 0.2 M sodium chloride, 0.1 M phosphate citrate pH 4.2, 10 % PEG 3000 |