6GS1
Crystal structure of peptide transporter DtpA-nanobody in MES buffer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-04 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.966 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.460, 120.720, 163.330 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.160 - 3.290 |
R-factor | 0.2521 |
Rwork | 0.252 |
R-free | 0.26290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4q65 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.447 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.160 | 3.408 |
High resolution limit [Å] | 3.290 | 3.290 |
Rmerge | 0.267 | |
Number of reflections | 17262 | |
<I/σ(I)> | 6.46 | |
Completeness [%] | 99.0 | |
Redundancy | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | PEG 600, magnesium chloride, MES buffer, pH 6.5 |