6GQZ
Petrobactin-binding engineered lipocalin without ligand
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-31 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.91840 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.990, 65.950, 67.940 |
Unit cell angles | 90.00, 96.77, 90.00 |
Refinement procedure
Resolution | 33.410 - 1.400 |
R-factor | 0.1396 |
Rwork | 0.137 |
R-free | 0.18120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4mvi |
RMSD bond length | 0.011 |
RMSD bond angle | 1.533 |
Data reduction software | MOSFLM (7.2.2) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.6.1) |
Refinement software | REFMAC (5.8.0222) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 67.466 | 33.733 | 1.480 |
High resolution limit [Å] | 1.181 | 4.430 | 1.400 |
Rmerge | 0.059 | 0.356 | |
Rmeas | 0.072 | 0.063 | 0.388 |
Rpim | 0.028 | 0.023 | 0.152 |
Number of reflections | 64603 | 2167 | 9241 |
<I/σ(I)> | 13.1 | 7.7 | 2.1 |
Completeness [%] | 96.3 | 98.8 | 95.1 |
Redundancy | 6.1 | 7.2 | 6.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 293 | 1.8 M ammonium sulfate, 0.1 M bicine/NaOH |