6GQ5
Crystal Structure of the PSMalpha3 Peptide Mutant L15A Forming Cross-Alpha Amyloid-like Fibril
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-10 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 0.9677 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 28.410, 10.670, 29.600 |
Unit cell angles | 90.00, 105.87, 90.00 |
Refinement procedure
Resolution | 17.470 - 1.500 |
R-factor | 0.1995 |
Rwork | 0.194 |
R-free | 0.24490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5i55 |
RMSD bond length | 0.019 |
RMSD bond angle | 1.692 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 17.470 | 17.470 | 1.540 |
High resolution limit [Å] | 1.500 | 6.710 | 1.500 |
Rmerge | 0.137 | 0.044 | 0.559 |
Rmeas | 0.171 | 0.055 | 0.692 |
Number of reflections | 2854 | 41 | 207 |
<I/σ(I)> | 4.09 | 6.99 | 1.56 |
Completeness [%] | 96.3 | 87.2 | 95 |
Redundancy | 2.68 | 2.293 | 2.652 |
CC(1/2) | 0.987 | 0.998 | 0.851 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | Reservoir contained 0.1 M CAPS pH 10.5, 40% v/v 2-Methyl-2,4-pentanediol |