6GQ2
Crystal Structure of the PSMalpha3 Peptide Mutant K12A Forming Cross-Alpha Amyloid-like Fibril
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-10 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 0.9677 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 52.940, 13.150, 25.970 |
Unit cell angles | 90.00, 112.26, 90.00 |
Refinement procedure
Resolution | 14.610 - 1.540 |
R-factor | 0.2067 |
Rwork | 0.203 |
R-free | 0.23600 |
Structure solution method | AB INITIO PHASING |
RMSD bond length | 0.013 |
RMSD bond angle | 1.419 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | Arcimboldo |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 14.610 | 14.610 | 1.580 |
High resolution limit [Å] | 1.540 | 6.880 | 1.540 |
Rmerge | 0.114 | 0.080 | 0.836 |
Rmeas | 0.142 | 0.098 | 1.032 |
Number of reflections | 2477 | 29 | 172 |
<I/σ(I)> | 4.83 | 11.54 | 1.2 |
Completeness [%] | 94.1 | 80.6 | 91.5 |
Redundancy | 2.77 | 2.552 | 2.721 |
CC(1/2) | 0.983 | 0.993 | 0.772 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | Reservoir contained 0.1 M HEPES pH 7.5, 0.5 M Ammonium Sulfate, 30% v/v 2-Methyl-2,4-pentanediol |