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6GNX

Crystal structure of the MAJIN-TERB2 heterotetrameric complex - selenomethionine derivative

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-15
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9159
Spacegroup nameP 32 2 1
Unit cell lengths59.880, 59.880, 159.930
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.329 - 2.900
R-factor0.2589
Rwork0.254
R-free0.30390
Structure solution methodSAD
RMSD bond length0.003
RMSD bond angle0.539
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX ((dev_3126: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.3303.080
High resolution limit [Å]2.9002.900
Rmeas0.1363.015
Rpim0.0240.553
Number of reflections79151250
<I/σ(I)>28.22.3
Completeness [%]100.0100
Redundancy56.655.1
CC(1/2)1.0000.885
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.12M 1,6-Hexanediol; 0.12M 1-Butanol; 0.12M 1,2-Propanediol (racemic); 0.12M 2-Propanol; 0.12M 1,4-Butanediol; 0.12M 1,3-Propanediol, 55.5 mM MES pH 3.11, 44.5 mM imidazole pH 10.23; 12.5% w/v PEG 1000; 12.5% w/v PEG 3350; 12.5% v/v MPD

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PDB entries from 2024-05-15

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