6GN9
Crystal structure of a thioredoxin from Clostridium acetobutylicum at 1.75 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-09 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00001 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 30.031, 42.388, 84.522 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.261 - 1.750 |
R-factor | 0.2027 |
Rwork | 0.202 |
R-free | 0.21790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3dyr |
RMSD bond length | 0.002 |
RMSD bond angle | 0.511 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.261 | 1.813 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.089 | 2.370 |
Rmeas | 0.093 | 2.470 |
Number of reflections | 11442 | 1112 |
<I/σ(I)> | 15.95 | |
Completeness [%] | 99.8 | 99.19 |
Redundancy | 12.4 | 12.6 |
CC(1/2) | 0.999 | 0.398 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.2 M calcium acetate, 0.1 M sodium cacodylate pH 6.5, 40% (v/v) PEG 600 |