Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6GJR

Cyclophilin A complexed with tri-vector ligand 9.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2017-12-10
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97947
Spacegroup nameP 21 21 21
Unit cell lengths42.510, 53.170, 87.680
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.300 - 1.690
R-factor0.20316
Rwork0.200
R-free0.26183
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5noy
RMSD bond length0.019
RMSD bond angle1.950
Data reduction softwarexia2
Data scaling softwareAimless
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.3001.680
High resolution limit [Å]1.6501.650
Rmerge0.124
Rmeas0.137
Rpim0.0580.482
Number of reflections237001089
<I/σ(I)>71.2
Completeness [%]96.490.8
Redundancy4.73.6
CC(1/2)0.9930.562
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8279.15PEG 8000, Tris-HCl

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon