6GGY
Paenibacillus sp. YM1 laminaribiose phosphorylase with sulphate bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 146.704, 146.704, 222.950 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 103.740 - 1.950 |
R-factor | 0.2027 |
Rwork | 0.202 |
R-free | 0.22320 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.400 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.31) |
Phasing software | CRANK2 |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 103.740 | 103.740 | 1.980 |
High resolution limit [Å] | 1.950 | 10.680 | 1.950 |
Rmerge | 0.210 | 0.037 | 1.913 |
Rmeas | 0.216 | 0.039 | 1.966 |
Rpim | 0.050 | 0.010 | 0.448 |
Total number of observations | 3267901 | ||
Number of reflections | 176355 | 1266 | 8640 |
<I/σ(I)> | 13 | ||
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 18.5 | 15.1 | 18.8 |
CC(1/2) | 0.998 | 0.999 | 0.696 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Null |