6GD9
Cytochrome c in complex with Sulfonato-calix[8]arene, P43212 form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-16 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.98 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 101.590, 101.590, 86.520 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 71.830 - 2.650 |
R-factor | 0.2447 |
Rwork | 0.243 |
R-free | 0.28640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ycc |
RMSD bond length | 0.005 |
RMSD bond angle | 1.182 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 71.830 | 71.830 | 2.780 |
High resolution limit [Å] | 2.650 | 8.790 | 2.650 |
Rmerge | 0.166 | 0.079 | 0.507 |
Rmeas | 0.175 | 0.084 | 0.535 |
Rpim | 0.054 | 0.028 | 0.166 |
Number of reflections | 13680 | 445 | 1786 |
<I/σ(I)> | 9.8 | ||
Completeness [%] | 99.9 | 99.9 | 100 |
Redundancy | 10 | 9.3 | 10.1 |
CC(1/2) | 0.988 | 0.993 | 0.507 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 1.85 M ammonium sulfate 0.1 M HEPES pH 7.0 0.2 M NaCl (2x protein solution : 1x crystallisation condition) |