6GD0
Trypanosoma brucei PTR1 in complex with inhibitor 4g (F133)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-04 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.91730 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 74.960, 91.120, 82.970 |
Unit cell angles | 90.00, 115.90, 90.00 |
Refinement procedure
Resolution | 67.430 - 1.740 |
R-factor | 0.15599 |
Rwork | 0.154 |
R-free | 0.18998 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jdc |
RMSD bond length | 0.014 |
RMSD bond angle | 1.728 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0222) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 67.430 | 1.830 |
High resolution limit [Å] | 1.740 | 1.740 |
Rmerge | 0.064 | 0.275 |
Rmeas | 0.074 | 0.324 |
Rpim | 0.037 | 0.169 |
Number of reflections | 102374 | 14739 |
<I/σ(I)> | 15.3 | 6.2 |
Completeness [%] | 99.6 | 98.8 |
Redundancy | 3.9 | 3.8 |
CC(1/2) | 0.998 | 0.889 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 297 | 2-2.5 M sodium acetate, 0.1 M sodium citrate, pH5 |