6GB4
The Structure of variant S328A of the Mo-insertase domain Cnx1E from Arabidopsis thaliana in complex with AMP and molybdate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-22 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 65.310, 122.580, 133.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.290 - 1.648 |
R-factor | 0.194 |
Rwork | 0.193 |
R-free | 0.21800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5g2r |
RMSD bond length | 0.010 |
RMSD bond angle | 1.250 |
Data reduction software | XDS (Jun 1, 2017) |
Data scaling software | STARANISO (1.10.9) |
Phasing software | PHASER (2.8.1) |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 90.136 | 1.757 |
High resolution limit [Å] | 1.648 | 1.648 |
Rmerge | 0.055 | 1.820 |
Rmeas | 0.058 | 1.899 |
Rpim | 0.023 | 0.538 |
Number of reflections | 53674 | 2683 |
<I/σ(I)> | 23.5 | 1.3 |
Completeness [%] | 83.0 | 24 |
Redundancy | 13.2 | 12.2 |
CC(1/2) | 1.000 | 0.637 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M sodium formate, 0.1 M ammonium acetate, 0.1 M sodium citrate tribasic dihydrate, 0.1 M sodium potassium tartrate tetrahydrate, 0.1 M sodium oxamate; 0.1 M Tris BICINE pH 8.5; 10 % (w/v) PEG 4000, 20 % glycerol; 0.015 M sodium molybdate |